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Table 1 Strains and plasmids

From: Systems biology of electrogenic Pseudomonas putida - multi-omics insights and metabolic engineering for enhanced 2-ketogluconate production

Strains and plasmids

Description

Reference

E. coli

  

DH5α λpir

Host for plasmid amplification: supE44, ΔlacU169 (φ80 lacZΔM15), hsdR17 (rk−mk+), recA1, endA1, thi1, gyrA, relA, λpir lysogen

Biomedal Life Sci., Seville, Spain

CC118λpir

Mating donor strain: Δ(ara-leu), araD, ΔlacX174, galE, galK, phoA, thi1, rpsE, rpoB, argE (Am), recA1, lysogenic λpir

[94]

HB101

Mating helper strain: SmR, hsdR-M+, pro, leu, thi, recA

[95]

Plasmids

  

KT2440

Wild type

[2]

ΔscpC

KT2440 derivative: ΔscpC (PP_0154)

This work

ΔPP_5266

KT2440 derivative: ΔPP_5266

This work

ΔacsAI ΔacsAII

KT2440 derivative: ΔacsAI (PP_4487) ΔacsAII (ΔPP_4702)

This work

ΔaldBI ΔaldBII

KT2440 derivative: ΔaldBI (ΔPP_0545) ΔaldBII (or pedI, ΔPP_2680)

This work

Plasmids

  

pGNW2

Suicide plasmid for integration/deletion: KmR, oriR6K, lacZα with two flanking I-SceI sites, P 14 g→msfGFP

[74]

pSEVA6213S

Helper plasmid: GmR, oriV (RK2), xylS, PEM7→I-SceI

[74]